brook [Sun, 15 Apr 2012 17:54:23 +0000 (17:54 +0000)]
Merge from vendor branch TNF:
Import R DBI v0.2-5.
A database interface (DBI) definition for communication between R and
relational database management systems. All classes in this package
are virtual and need to be extended by the various R/DBMS
implementations.
brook [Sun, 15 Apr 2012 17:54:23 +0000 (17:54 +0000)]
Import R DBI v0.2-5.
A database interface (DBI) definition for communication between R and
relational database management systems. All classes in this package
are virtual and need to be extended by the various R/DBMS
implementations.
brook [Sun, 15 Apr 2012 17:38:14 +0000 (17:38 +0000)]
Updated math/R-gstat to 1.0.10
brook [Sun, 15 Apr 2012 17:37:43 +0000 (17:37 +0000)]
Update to gstat v1.0-10, add LICENSE, and regularize package files.
brook [Sun, 15 Apr 2012 17:34:37 +0000 (17:34 +0000)]
Updated math/R-spacetime to 0.6.2
brook [Sun, 15 Apr 2012 17:33:52 +0000 (17:33 +0000)]
Added R-spacetime.
brook [Sun, 15 Apr 2012 17:33:04 +0000 (17:33 +0000)]
Import R-spacetime v0.6-2.
A package with classes and methods for spatio-temporal data. In
particular, space-time regular lattices, sparse lattices, and
irregular data are supported, with limited support for trajectories,
but not for topologies with S/T interactions such as space-time
prisms. Utility functions are provided for plotting data as map
sequences (lattice or animation) or multiple time series; for spatial
and temporal selection, as well as methods for retrieving coordinates,
for subsetting, print, summary, etc.
brook [Sun, 15 Apr 2012 17:33:04 +0000 (17:33 +0000)]
Merge from vendor branch TNF:
Import R-spacetime v0.6-2.
A package with classes and methods for spatio-temporal data. In
particular, space-time regular lattices, sparse lattices, and
irregular data are supported, with limited support for trajectories,
but not for topologies with S/T interactions such as space-time
prisms. Utility functions are provided for plotting data as map
sequences (lattice or animation) or multiple time series; for spatial
and temporal selection, as well as methods for retrieving coordinates,
for subsetting, print, summary, etc.
brook [Sun, 15 Apr 2012 17:15:34 +0000 (17:15 +0000)]
Updated math/R-xts to 0.8.6
brook [Sun, 15 Apr 2012 17:14:34 +0000 (17:14 +0000)]
Add R-xts.
brook [Sun, 15 Apr 2012 17:13:47 +0000 (17:13 +0000)]
Import R-xts v0.8-6.
Provide for uniform handling of R's different time-based data classes
by extending zoo, maximizing native format information preservation
and allowing for user level customization and extension, while
simplifying cross-class interoperability.
brook [Sun, 15 Apr 2012 17:13:47 +0000 (17:13 +0000)]
Merge from vendor branch TNF:
Import R-xts v0.8-6.
Provide for uniform handling of R's different time-based data classes
by extending zoo, maximizing native format information preservation
and allowing for user level customization and extension, while
simplifying cross-class interoperability.
brook [Sun, 15 Apr 2012 17:12:18 +0000 (17:12 +0000)]
Updated math/R-zoo to 1.7.7
brook [Sun, 15 Apr 2012 17:11:33 +0000 (17:11 +0000)]
Add R-zoo.
brook [Sun, 15 Apr 2012 17:10:18 +0000 (17:10 +0000)]
Import R-zoo v1.7-7.
An S3 class with methods for totally ordered indexed observations. It
is particularly aimed at irregular time series of numeric
vectors/matrices and factors. Zoo's key design goals are independence
of a particular index/date/time class and consistency with ts and base
R by providing methods to extend standard generics.
brook [Sun, 15 Apr 2012 17:10:18 +0000 (17:10 +0000)]
Merge from vendor branch TNF:
Import R-zoo v1.7-7.
An S3 class with methods for totally ordered indexed observations. It
is particularly aimed at irregular time series of numeric
vectors/matrices and factors. Zoo's key design goals are independence
of a particular index/date/time class and consistency with ts and base
R by providing methods to extend standard generics.
brook [Sun, 15 Apr 2012 16:57:41 +0000 (16:57 +0000)]
Updated math/R-RArcInfo to 0.4.12
brook [Sun, 15 Apr 2012 16:57:19 +0000 (16:57 +0000)]
Update to RArcInfo v0.4-12, added LICENSE and regularized package files.
brook [Sun, 15 Apr 2012 16:54:45 +0000 (16:54 +0000)]
Updated math/R-genetics to 1.3.6
brook [Sun, 15 Apr 2012 16:54:17 +0000 (16:54 +0000)]
Updated to genetics v1.3.6, added LICENSE (commented) and updated MAINTAINER.
brook [Sun, 15 Apr 2012 16:50:45 +0000 (16:50 +0000)]
Updated math/R-RColorBrewer to 1.0.5
brook [Sun, 15 Apr 2012 16:49:03 +0000 (16:49 +0000)]
Add R-RColorBrewer.
brook [Sun, 15 Apr 2012 16:43:47 +0000 (16:43 +0000)]
Import of RColorBrewer v1.0-5.
The packages provides palettes for drawing nice maps shaded according
to a variable.
brook [Sun, 15 Apr 2012 16:43:47 +0000 (16:43 +0000)]
Merge from vendor branch TNF:
Import of RColorBrewer v1.0-5.
The packages provides palettes for drawing nice maps shaded according
to a variable.
brook [Sun, 15 Apr 2012 16:35:28 +0000 (16:35 +0000)]
Updated math/R-mapproj to 1.1.8.3
brook [Sun, 15 Apr 2012 16:35:01 +0000 (16:35 +0000)]
Update to mapproj v1.1-8.3, add LICENSE and update MAINTAINER.
brook [Sun, 15 Apr 2012 16:32:47 +0000 (16:32 +0000)]
Add Lucent Public License Version 1.02 (OSI certified). Referenced by
math/R-mapproj.
brook [Sun, 15 Apr 2012 16:16:07 +0000 (16:16 +0000)]
Updated math/R-clim.pact to 2.3.10
brook [Sun, 15 Apr 2012 16:15:31 +0000 (16:15 +0000)]
Update to clim.pact v2.3-10, add LICENSE and regularize package files.
brook [Sun, 15 Apr 2012 16:12:52 +0000 (16:12 +0000)]
Updated math/R-gdata to 2.8.2
brook [Sun, 15 Apr 2012 16:12:28 +0000 (16:12 +0000)]
Update to gdata v2.8.2, add LICENSE and regularize package files.
brook [Sun, 15 Apr 2012 16:04:10 +0000 (16:04 +0000)]
Updated math/R-wle to 0.9.4
brook [Sun, 15 Apr 2012 16:03:42 +0000 (16:03 +0000)]
Update to wle v0.9-4, add LICENSE and regularize package files.
brook [Sun, 15 Apr 2012 16:00:38 +0000 (16:00 +0000)]
Updated math/R-classInt to 0.1.17
brook [Sun, 15 Apr 2012 16:00:01 +0000 (16:00 +0000)]
Update to classInt v0.1-17, add LICENSE and regularize package files.
wiz [Sun, 15 Apr 2012 15:50:23 +0000 (15:50 +0000)]
Updated devel/meld to 1.5.4
wiz [Sun, 15 Apr 2012 15:50:14 +0000 (15:50 +0000)]
Update to 1.5.4:
2012-4-3 meld 1.5.4
====================
Fixes:
* Slightly faster diff calculation (Piotr Piastucki)
* Avoid too-tall commit dialogues (Nguyễn Hồng Quân)
* Minor bug fixes and performance improvments (Kai Willadsen)
Translation updates:
* Alexander Shopov (bg)
* Fran Diéguez (gl)
* Kjartan Maraas (nb)
* Kristjan SCHMIDT (eo)
* Nguyễn Thái Ngọc Duy (vi)
* Toshiharu Kudoh (ja)
* Trương Ứng Minh (vi)
* Мирослав Николић (sr) (sr@latin)
brook [Sun, 15 Apr 2012 15:50:07 +0000 (15:50 +0000)]
Updated math/R-Rcmdr to 1.8.4
brook [Sun, 15 Apr 2012 15:49:00 +0000 (15:49 +0000)]
Update to Rcmdr v1.8-4, add LICENSE and update MAINTAINER.
wiz [Sun, 15 Apr 2012 15:47:02 +0000 (15:47 +0000)]
Updated emulators/cmdpack to 1.03
wiz [Sun, 15 Apr 2012 15:46:53 +0000 (15:46 +0000)]
Update to 1.03:
v1.03:
pecompat: New app
uips: Fixed a bug that caused bytes near the end of the file to be unnecessarily included in the .ips patch
cdpatch: Combining -f and -v now lists all errors, while still ignoring them
cdpatch: -x option now preserves modification time when possible
brook [Sun, 15 Apr 2012 15:46:30 +0000 (15:46 +0000)]
Updated math/R-statmod to 1.4.14
brook [Sun, 15 Apr 2012 15:45:16 +0000 (15:45 +0000)]
Update to statmod v1.4.14, add LICENSE and regularize package files.
wiz [Sun, 15 Apr 2012 15:44:41 +0000 (15:44 +0000)]
Updated sysutils/desktop-file-utils to 0.20
wiz [Sun, 15 Apr 2012 15:44:32 +0000 (15:44 +0000)]
Update to 0.20:
============
Version 0.20
============
desktop-file-install
- fix list of locale strings without trailing slash (Matthias Clasen)
desktop-file-validate
- add MATE and Razor to list of registered environments (Vincent)
- validate Desktop Actions (Giovanni Campagna, Vincent)
wiz [Sun, 15 Apr 2012 15:43:53 +0000 (15:43 +0000)]
Updated textproc/raptor2 to 2.0.7
brook [Sun, 15 Apr 2012 15:43:46 +0000 (15:43 +0000)]
Updated math/R-sgeostat to 1.0.24
wiz [Sun, 15 Apr 2012 15:43:43 +0000 (15:43 +0000)]
Update to 2.0.7. Fix a bug in buildlink3.mk while here.
2012-03-22 Raptor2 Version 2.0.7 Released
CVE-2012-0037 fixed
Removed Expat support
Removed internal Unicode NFC code for better and optional ICU
Added options for denying file requests and XML entity loading
Added options for SSL certificate verifying
Fixed reported issues: 0000448 and 0000469
brook [Sun, 15 Apr 2012 15:43:26 +0000 (15:43 +0000)]
Update to sgeostat v1.0-24, add LICENSE and regularize package files.
brook [Sun, 15 Apr 2012 15:39:56 +0000 (15:39 +0000)]
Updated math/R-ncdf to 1.6.6
brook [Sun, 15 Apr 2012 15:39:34 +0000 (15:39 +0000)]
Update to ncdf v1.6.6, add LICENSE and regularize package files.
brook [Sun, 15 Apr 2012 15:38:37 +0000 (15:38 +0000)]
Updated math/R-pixmap to 0.4.11
brook [Sun, 15 Apr 2012 15:38:14 +0000 (15:38 +0000)]
Update to pixmap v0.4-11, add LICENSE and update MAINTAINER.
wiz [Sun, 15 Apr 2012 15:37:56 +0000 (15:37 +0000)]
Updated devel/automake to 1.11.5
wiz [Sun, 15 Apr 2012 15:37:46 +0000 (15:37 +0000)]
Update to 1.11.5:
Bugs fixed in 1.11.5:
* Bugs introduced by 1.11.3:
- Vala files with '.vapi' extension are now recognized and handled
correctly again. See automake bug#11222.
- Vala support work again for projects that contain some program
built from '.vala' (and possibly '.c') sources and some other
program built from '.c' sources *only*. See automake bug#11229.
\f
New in 1.11.4:
* WARNING: Future backward-incompatibilities!
- The support for the "obscure" multilib feature has been deprecated,
and will be moved out of the automake core in the next major Automake
release (1.12).
- The support for ".log -> .html" conversion and the check-html and
recheck-html targets will be removed in the next major Automake
release (1.12).
- The obsolescent AM_WITH_REGEX macro has been deprecated (since the
GNU rx library has been decommissioned), and will be removed in the
next major Automake release (1.12).
- The `lzma' compression format for distribution archives has been
deprecated in favor of `xz' and `lzip', and will be removed in the
next major Automake release (1.12).
- The `--acdir' option of aclocal is deprecated, and will probably be
removed in the next major Automake release (1.12).
- The exact order in which the directories in the aclocal macro
search path are looked up is probably going to be changed in the
next Automake release (1.12).
- The Automake support for automatic de-ANSI-fication will be removed
in the next major Automake release (1.12).
- Starting from the next Automake release (1.12), warnings in the
`extra-portability' category will be enabled by `-Wall' (right now,
one has to use `-Wextra-portability' explicitly).
* Miscellaneous changes:
- The 'ar-lib' script now ignores the "s" (symbol index) and "S" (no
symbol index) modifiers as well as the "s" action, as the symbol index
is created unconditionally by Microsoft lib. Also, the "q" (quick)
action is now a synonym for "r" (replace). Also, the script has been
ignoring the "v" (verbose) modifier already since Automake 1.11.3.
- When the 'compile' script is used to wrap MSVC, it now accepts an
optional space between the -I, -L and -l options and their respective
arguments, for better POSIX compliance.
- There is an initial, experimental support for automatic dependency
tracking with tcc (the Tiny C Compiler). Its associated depmode is
currently recognized as "icc" (but this and other details are likely
to change in future versions).
- Automatic dependency tracking now works also with the IBM XL C/C++
compilers, thanks to the new new depmode 'xlc'.
Bugs fixed in 1.11.4:
* Bugs introduced by 1.11.2:
- A definition of 'noinst_PYTHON' before 'python_PYTHON' (or similar)
don't cause spurious failures upon "make install" anymore.
- The user can now instruct the 'uninstall-info' rule not to update
the '${infodir}/dir' file by exporting the environment variable
'AM_UPDATE_INFO_DIR' to the value "no". This is done for consistency
with how the 'install-info' rule operates since automake 1.11.2.
* Long-standing bugs:
- It is now possible for a foo_SOURCES variable to hold Vala sources
together with C header files, as well as with sources and headers for
other supported languages (e.g., C++). Previously, only mixing C and
Vala sources was supported.
- If "aclocal --install" is used, and the first directory specified with
'-I' is non-existent, aclocal will now create it before trying to copy
files in it.
- An empty declaration of a "foo_PRIMARY" don't cause anymore the
generated install rules to create an empty $(foodir) directory;
for example, if Makefile.am contains something like:
pkglibexec_SCRIPTS =
if FALSE
pkglibexec_SCRIPTS += bar.sh
endif
the $(pkglibexec) directory will not be created upon "make install".
wiz [Sun, 15 Apr 2012 15:34:31 +0000 (15:34 +0000)]
+ akonadi-1.7.2, automake-1.11.5, cairo-gobject-1.12.0, calibre-0.8.47,
ffmpeg-
20120415.0.10.2, ffmpeg-
20120415.0.8.11, ffplay-
20120415.0.10.2,
gtkwave-3.3.35, help2man-1.40.8, libffi-3.0.11, libltdl-2.4.2,
liferea-1.8.5, modular-xorg-server-1.12.1, scamper-
20111202b
[pkg/46330], wine-devel-1.5.2, x264-devel-
20120414.
brook [Sun, 15 Apr 2012 15:34:04 +0000 (15:34 +0000)]
Updated math/R-mvtnorm to 0.9.9992
brook [Sun, 15 Apr 2012 15:33:38 +0000 (15:33 +0000)]
Update to mvtnorm v0.9-9992, add LICENSE and regularize package files.
brook [Sun, 15 Apr 2012 15:31:50 +0000 (15:31 +0000)]
Updated math/R-maps to 2.2.5
brook [Sun, 15 Apr 2012 15:30:55 +0000 (15:30 +0000)]
Update to maps v2.2-5, add LICENSE and update MAINTAINER.
wiz [Sun, 15 Apr 2012 15:29:48 +0000 (15:29 +0000)]
Add cairo-gobject (hi drochner) from last February
brook [Sun, 15 Apr 2012 15:29:16 +0000 (15:29 +0000)]
Updated math/R-hwde to 0.62
brook [Sun, 15 Apr 2012 15:28:51 +0000 (15:28 +0000)]
Update to hwde v0.62, add LICENSE and regularize package files.
brook [Sun, 15 Apr 2012 15:26:59 +0000 (15:26 +0000)]
Updated math/R-gtools to 2.6.2
brook [Sun, 15 Apr 2012 15:26:35 +0000 (15:26 +0000)]
Update to gtools v2.6.2, add LICENSE and regularize package files.
brook [Sun, 15 Apr 2012 15:25:09 +0000 (15:25 +0000)]
Update to e1071 v1.6, add LICENSE and regularize package files.
brook [Sun, 15 Apr 2012 15:23:09 +0000 (15:23 +0000)]
Updated math/R-date to 1.2.32
brook [Sun, 15 Apr 2012 15:22:37 +0000 (15:22 +0000)]
Update to date v1.2-32, add LICENSE and update MAINTAINER.
brook [Sun, 15 Apr 2012 15:20:52 +0000 (15:20 +0000)]
Update to circular v0.4-3, add LICENSE and regularize package files.
brook [Sun, 15 Apr 2012 15:19:00 +0000 (15:19 +0000)]
Updated math/R-chron to 2.3.42
brook [Sun, 15 Apr 2012 15:18:34 +0000 (15:18 +0000)]
Update to chron v2.3-42, add LICENSE and update MAINTAINER.
brook [Sun, 15 Apr 2012 15:16:20 +0000 (15:16 +0000)]
Updated math/R-car to 2.0.12
brook [Sun, 15 Apr 2012 15:15:48 +0000 (15:15 +0000)]
Update to car v2.0-12 and add LICENSE.
brook [Sun, 15 Apr 2012 15:12:58 +0000 (15:12 +0000)]
Remove duplicate entries.
brook [Sun, 15 Apr 2012 15:10:01 +0000 (15:10 +0000)]
Updated math/R-akima to 0.5.7
brook [Sun, 15 Apr 2012 15:09:26 +0000 (15:09 +0000)]
Update to akima v0.5-7, add LICENSE and regularize package files.
brook [Sun, 15 Apr 2012 15:07:34 +0000 (15:07 +0000)]
Add the ACM license. Referred to by math/R-akima.
brook [Sun, 15 Apr 2012 14:56:29 +0000 (14:56 +0000)]
Updated math/R-abind to 1.4.0
brook [Sun, 15 Apr 2012 14:55:50 +0000 (14:55 +0000)]
Update to abind v1.4-0, add LICENSE and regularize package files.
brook [Sun, 15 Apr 2012 14:51:34 +0000 (14:51 +0000)]
Updated math/R-R2HTML to 2.2
brook [Sun, 15 Apr 2012 14:51:05 +0000 (14:51 +0000)]
Update to R2HTML v2.2, add LICENSE and regularize package files.
brook [Sun, 15 Apr 2012 14:49:02 +0000 (14:49 +0000)]
Updated math/R-PHYLOGR to 1.0.7
brook [Sun, 15 Apr 2012 14:48:26 +0000 (14:48 +0000)]
Update to PHYLOGR v1.0.7, add LICENSE and regularize package files.
brook [Sun, 15 Apr 2012 14:46:13 +0000 (14:46 +0000)]
Updated math/R-ISwR to 2.0.6
brook [Sun, 15 Apr 2012 14:45:35 +0000 (14:45 +0000)]
Update to ISwR v2.0-6, add LICENSE and regularize package files.
brook [Sun, 15 Apr 2012 13:46:59 +0000 (13:46 +0000)]
Updated math/R-lmm to 0.5
brook [Sun, 15 Apr 2012 13:46:13 +0000 (13:46 +0000)]
Update to lmm v0.5 and regularize the package files.
brook [Sun, 15 Apr 2012 13:33:55 +0000 (13:33 +0000)]
Updated math/R-DAAG to 1.12
brook [Sun, 15 Apr 2012 13:33:06 +0000 (13:33 +0000)]
Update to DAAG v1.12 and regularize the package files.
brook [Sun, 15 Apr 2012 13:29:35 +0000 (13:29 +0000)]
Updated math/R-randomForest to 4.6.6
brook [Sun, 15 Apr 2012 13:28:39 +0000 (13:28 +0000)]
Update to randomForest v4.6-6. Add a LICENSE.
brook [Sun, 15 Apr 2012 13:16:35 +0000 (13:16 +0000)]
Add a LICENSE and regularize the package files.
brook [Sun, 15 Apr 2012 13:13:17 +0000 (13:13 +0000)]
Add a LICENSE and regularize the Makefile format.
brook [Sun, 15 Apr 2012 13:09:40 +0000 (13:09 +0000)]
Update MAINTAINER and add LICENSE.
obache [Sun, 15 Apr 2012 13:08:07 +0000 (13:08 +0000)]
works with OpenBSD-5.0.
obache [Sun, 15 Apr 2012 13:03:25 +0000 (13:03 +0000)]
Updated pkgtools/bootstrap-mk-files to
20120415
obache [Sun, 15 Apr 2012 13:03:11 +0000 (13:03 +0000)]
Update to
20120415.
Rewrite OpenBSD.bsd.man.mk, based on current NetBSD.bsd.man.mk and changed to
use mandoc.
Fixes manual pages installation with packages using USE_BSD_MAKEFILE=yes
on OpenBSD-5.0.
ryoon [Sun, 15 Apr 2012 12:25:07 +0000 (12:25 +0000)]
Updated www/apache24 to 2.4.1nb1
ryoon [Sun, 15 Apr 2012 12:23:49 +0000 (12:23 +0000)]
Bump PKGREVISION.
* Add some modules like apache22
* Fix lua option build
tron [Sun, 15 Apr 2012 11:56:53 +0000 (11:56 +0000)]
Note update of the "phpmyadmin" package to version 3.4.11.